CDS
| Accession Number | TCMCG015C08190 |
| gbkey | CDS |
| Protein Id | XP_027105199.1 |
| Location | complement(join(10642655..10642715,10643007..10643075,10643174..10643290,10644205..10644317,10644405..10644479,10644810..10644932,10646101..10646318,10646404..10646460,10647117..10647638,10648118..10648292,10648489..10648632,10648718..10648792,10654654..10654724,10655002..10655104,10655184..10655410,10656478..10656595,10657570..10657700,10658069..10658093)) |
| Gene | LOC113725946 |
| GeneID | 113725946 |
| Organism | Coffea arabica |
Protein
| Length | 807aa |
| Molecule type | protein |
| Topology | linear |
| Data_file_division | PLN |
| dblink | BioProject:PRJNA506972 |
| db_source | XM_027249398.1 |
| Definition | katanin p80 WD40 repeat-containing subunit B1 homolog isoform X1 [Coffea arabica] |
EGGNOG-MAPPER Annotation
| COG_category | Z |
| Description | May participate in a complex which severs microtubules in an ATP-dependent manner. Microtubule severing may promote rapid reorganization of cellular microtubule arrays |
| KEGG_TC | - |
| KEGG_Module | - |
| KEGG_Reaction | - |
| KEGG_rclass | - |
| BRITE |
ko00000
[VIEW IN KEGG] ko04812 [VIEW IN KEGG] |
| KEGG_ko |
ko:K18643
[VIEW IN KEGG] |
| EC | - |
| KEGG_Pathway | - |
| GOs |
GO:0000151
[VIEW IN EMBL-EBI] GO:0005575 [VIEW IN EMBL-EBI] GO:0005622 [VIEW IN EMBL-EBI] GO:0005623 [VIEW IN EMBL-EBI] GO:0031461 [VIEW IN EMBL-EBI] GO:0032991 [VIEW IN EMBL-EBI] GO:0044424 [VIEW IN EMBL-EBI] GO:0044464 [VIEW IN EMBL-EBI] GO:0080008 [VIEW IN EMBL-EBI] GO:1902494 [VIEW IN EMBL-EBI] GO:1990234 [VIEW IN EMBL-EBI] |
Sequence
| CDS: ATGGCCAAGCGCGGATATAAATTGCAGGAGTTTGTGGCGCATTCGGGGAATGTAAATTGTTTAAGGATTGGGAAGAAGAACTTTCGGCAATTTATAACAGGTGGAGATGATCAAGTGGTCAATCTTTGGTCAATTGGCAATCCTGCACCTTTATCGTGTCTTTCTGGTCACTCAAGTCCAGTTGAATCTGTAGCTTTTGATTCTTCGGAGATCTTGGTGGTTGCCGGAGCATCATCTGGTGTAATTAAATTGTGGGACCTTGAAGAAACAAAGATGGTTCGCACTCTTTCTGGACACAGATCCTATTGCACTGCTGTGGAATTCCATCCATTTGGTGAATTTTTTGCATCGGGTTCCATGGACACTAATCTAAAGATATGGGATATCAGAAAGAAAGGATGCATTCATACATATAAGGGTCATACTCGAGGAATTAGCACTATAAGGTTTACTCCTGATGGCCGATGGGTGGTTTCTGGTGGATTTGATAATGTTGTAAAGATATGGGACCTGACAGCTGGAAAACTCTTGCATGATTTCAAGTTTCATGAGGGACATATCCGATCAATAGACTTCCATCCACTTGAATTTCTTCTGGCTACAGGCTCAGCGGATCGAACTGTTAAGTTTTGGGATTTGGAAACTTTTGAAATGATTGGGTCTGCCAGGCGTGAGACTGCTGGAGTTCGATCCATAACGTTTCACCCTGATGGAAGAACGCTATTCTGTGGATTGGATGATAGTTTGAAGGTGTATTCATGGGAGCCAGTAATTTGTCATGACTCTGTTGATATGGGATGGTCAACACTAGGTGATATGTGCGTCCATGATGGTAAACTCTTGGGTGGTGCTTATTTTCAGAACTCTGTTGGAGTTTGGGTAGCTGATATTTCGCTTATTGAGCCATATGGTGGGGGTGCGATACCTGAGCATGGCCCTCCTGAGCAGAAATATGAAGTTCAAGAAAATCCTTCTGAGAAATCCATAAGCCATAGGAGGTCCAATTCAAGTTTCCGCAGCATGTCACCAGATATTGATTCTAAAGACATTAAGAATATCTATGTGGATACTGAAGCTTGTAAGCCTGTTACTTCAACAAAAGTTGGGTCTATTAATTCTCCAAATTCTGTAGACCCTTGTGAACCAAAGGAGATTACGACTTTGGCAATTCAGAAGCAGGGCTCTGCGGTAAGGGTGCATGCAAAGACTAATGTGTCAGGGGATGCCAAATCCTTCATTGTGCCTACAGTGATACCTCGTGAATATCCTGGTGCAAAAGATAAGACTGGTTCTAGAAGGGAATCTTTTGCTAGCAGTAGGGCCATTACTGGTACACTTAAGCCTTCCCATATCCGAAGGTCATCAAATACAAAGTCTGATATGGAGAAAATCTCAAATGGATTGGAAACCAGGTCTCTTGGCAGTATGACGACTGCAGTGGAGACTAAAACGGAACCAAACTTCAACAGCAAGCTTGTTTGCAACAATAATGTGAAGGAATTCTCTGAGGGAGAAGATCTGAGCATCAAGAATGTTGGAGAGAAGCTAGAAAAAGCTACATCGCTGACAAGACTGTCAAATCAGGAAAATGGTGAAAAGCCCCAGGAGTGCAACAAAGGGGTTTTTCCTATTAGAGTTGTGAATGGAGTGGCAGTTGTGCGAGGTAGGACACGCAGTTTGGTTGAGAGATTTGAAAAAAGAGAGGGATTGAGTAGTAATGAAGCTCAAACGCCTGAGAAAGCTCCTAACTTTAGTAGCAAAGAAGCTCAAATGCCTGAGAATGCTCCTAACTTCAGTAGCAAAGAAGCTCAAATGCCTGACAGATGTCCTAGTTCAATAACTGAGGCAGCTAAAGCATCTTTGCAGGATTATAATCCACCAAATGCTGGAAGGGAGCCAGATACAGATGATAATCATGTCATTGAAGCGCTGATGCAAAATCATGACGTGCTATTAAGCATTTTTCGGTCACGCCTGACAAAGTTACAAGTGGTGCGGCATTTTTGGGAACGCAATGATGTTAAAGGTGCAATAAACGCTATGATGAAGTTGCCTGATCATTCTGTACAAGCAGATGTAGTCAGTGTTCTAAAGGAGAAAATGGAGATTATTACCTTAGAGCTCTTCTCATGCTTACTACCTGTGCTTTTAAGCTTACTGGATAGCAAAATTGATAGGCATGCTAGTGTTTCTCTGGAGATGCTCTTGAAACTCATTGCCGTCTTCGGACCTTTAGTTCGTTCAACCGTTTCAGCACCTCGTGCTGTTGGGGTTGATCTTCATGCAGAAGAAAGACGTGAAAGCTGCAAACAGTGTTTTGTCCATCTTCAGAATGTTCAGAAAATTCTTCCGTCACTGATTCAGAGGGGTGGTGTGGTGGCAAGATGTGCACATGAACTAAGCCTTGTTCTTCGAGAACCGTAA |
| Protein: MAKRGYKLQEFVAHSGNVNCLRIGKKNFRQFITGGDDQVVNLWSIGNPAPLSCLSGHSSPVESVAFDSSEILVVAGASSGVIKLWDLEETKMVRTLSGHRSYCTAVEFHPFGEFFASGSMDTNLKIWDIRKKGCIHTYKGHTRGISTIRFTPDGRWVVSGGFDNVVKIWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFEMIGSARRETAGVRSITFHPDGRTLFCGLDDSLKVYSWEPVICHDSVDMGWSTLGDMCVHDGKLLGGAYFQNSVGVWVADISLIEPYGGGAIPEHGPPEQKYEVQENPSEKSISHRRSNSSFRSMSPDIDSKDIKNIYVDTEACKPVTSTKVGSINSPNSVDPCEPKEITTLAIQKQGSAVRVHAKTNVSGDAKSFIVPTVIPREYPGAKDKTGSRRESFASSRAITGTLKPSHIRRSSNTKSDMEKISNGLETRSLGSMTTAVETKTEPNFNSKLVCNNNVKEFSEGEDLSIKNVGEKLEKATSLTRLSNQENGEKPQECNKGVFPIRVVNGVAVVRGRTRSLVERFEKREGLSSNEAQTPEKAPNFSSKEAQMPENAPNFSSKEAQMPDRCPSSITEAAKASLQDYNPPNAGREPDTDDNHVIEALMQNHDVLLSIFRSRLTKLQVVRHFWERNDVKGAINAMMKLPDHSVQADVVSVLKEKMEIITLELFSCLLPVLLSLLDSKIDRHASVSLEMLLKLIAVFGPLVRSTVSAPRAVGVDLHAEERRESCKQCFVHLQNVQKILPSLIQRGGVVARCAHELSLVLREP |